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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143925452_143933933_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143925452 - 143933933

Intron Length:

8482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TATTATATACAT

Flanking Amino Acid:

PGRDGAQGQRGLPGKDGPTG

Intron Amino Acid Position:

1562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

71.9

36.1

Major BPS

75.9

0.64

66.1

40.5

Major PPT

82.8

0.74

0.7

76.9

31.7

Minor 5ss

35.6

-1.6

3.2

46.9

Minor BPS

45.4

-0.2

68.52

41.8

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000020981

143824288 - 143950114

125827

ENSAPLT00000008884

143824288 - 143949881

125594

ENSAPLT00000047738

143824288 - 143950242

125955