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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143933988_143936466_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143933988 - 143936466

Intron Length:

2479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGTAT

U12 Branch Point Sequence:

TCACCAATAAGT

Flanking Amino Acid:

TGPQGPPGPVGIPGAPGVPG

Intron Amino Acid Position:

1580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

88.7

25.1

Major BPS

0.05

1.4

43.5

Major PPT

81.6

0.71

0.7

Minor 5ss

36.4

-1.5

48.3

41.8

Minor BPS

45.4

-0.2

2.1

64.76

44.8

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047738

143824288 - 143950242

125955

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000020981

143824288 - 143950114

125827

ENSAPLT00000008884

143824288 - 143949881

125594