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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143936539_143938256_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143936539 - 143938256

Intron Length:

1718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

AATCTTTCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTGAATC

Flanking Amino Acid:

QGPQGDVGAPGAPGPKGERG

Intron Amino Acid Position:

1604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

72.6

33.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.3

0.48

0.8

65.8

Minor 5ss

32.5

-2

2.8

43.1

43.9

Minor BPS

63.8

0.41

1.6

76.19

33.8

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000020981

143824288 - 143950114

125827

ENSAPLT00000008884

143824288 - 143949881

125594

ENSAPLT00000047738

143824288 - 143950242

125955