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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143938785_143939296_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143938785 - 143939296

Intron Length:

512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

TTTCTCTTGACA

Flanking Amino Acid:

ARQVCEQLIQGHMARYNSIL

Intron Amino Acid Position:

1638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

80.7

33.8

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

82.7

0.74

0.9

79.9

32.1

Minor 5ss

35.6

-1.6

2.6

35.6

40.5

Minor BPS

77.4

0.86

1.1

83.73

29.3

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008884

143824288 - 143949881

125594

ENSAPLT00000047738

143824288 - 143950242

125955

ENSAPLT00000036897

143824288 - 143950242

125955

ENSAPLT00000020981

143824288 - 143950114

125827