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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143947422_143948312_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143947422 - 143948312

Intron Length:

891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTCG

5'SS Class:

strong_major

3'SS Sequence:

CCGTTTCACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

ACGCGTTTATCT

Flanking Amino Acid:

QGPRGPPGSTGPPGESRTGS

Intron Amino Acid Position:

1727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.8

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

70.2

0.45

0.9

65.3

35.2

Minor 5ss

-1.5

3.2

47.6

Minor BPS

45.6

-0.2

59.01

44.6

Associated Gene:

Gene:

COL14A1

Ensembl Gene ID:

ENSAPLG00000008273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020981

143824288 - 143950114

125827

ENSAPLT00000008884

143824288 - 143949881

125594

ENSAPLT00000047738

143824288 - 143950242

125955

ENSAPLT00000036897

143824288 - 143950242

125955