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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143987425_143987893_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

143987425 - 143987893

Intron Length:

469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTATGCATA

5'SS Class:

weak_major

3'SS Sequence:

TCTTCATTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTGTTCTTCATT

Flanking Amino Acid:

NNSRESLSMTDIYDEAAESL

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.1

64.4

41.6

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

87.3

0.84

0.7

28.5

Minor 5ss

51.2

0.04

2.4

62.2

43.4

Minor BPS

66.4

0.6

1.7

82.85

39.2

Associated Gene:

Gene:

MTBP

Ensembl Gene ID:

ENSAPLG00000005442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005660

143985099 - 144015167

30069