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Intron Name: Anas_platyrhynchos_platyrhynchos_2_143987953_143988892_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

143987953 - 143988892

Intron Length:

940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCTTT

5'SS Class:

weak_major

3'SS Sequence:

ACTGTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

GTTACTTTAAGT

Flanking Amino Acid:

HQLADKLPAPGRAMVDVILQ

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

78.8

38.3

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

82.4

0.73

0.9

37.4

Minor 5ss

68.6

0.63

2.3

82.3

37.5

Minor BPS

66.8

0.6

1.7

81.36

40.2

Associated Gene:

Gene:

MTBP

Ensembl Gene ID:

ENSAPLG00000005442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005660

143985099 - 144015167

30069