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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_144160980_144181308_F

Intron Information:

Intron Rank:
137579
Intron Class:
major
Intron Phase:
Intron Coordinates:
144160980 - 144181308
Intron Length:
20329

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAATCACC
5'SS Class:
major
3'SS Sequence:
TTCTTTTTTCCAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
GATTCAG
U12 Branch Point Sequence:
GTTTCTTTTTTC
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.5
0.7
1
71.7
38.4
Major BPS
50.5
0.01
1.6
63.4
44.3
Major PPT
94.1
0.99
0.6
87.9
29.5
Minor 5ss
40.7
-1
2.8
53.4
43.4
Minor BPS
42.6
-0.6
3.5
66.68
39.5

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000024090
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000019054
144160859 - 144181756
20898