About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_14434326_14458819_F

Intron Information:

Intron Rank:
142020
Intron Class:
major
Intron Phase:
Intron Coordinates:
14434326 - 14458819
Intron Length:
24494

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ATG|GTAGGAATC
5'SS Class:
major
3'SS Sequence:
TTTTGATTGACAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTGAT
U12 Branch Point Sequence:
TACTTTTTGATT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
75.8
0.61
1
71.6
38.4
Major BPS
96.4
1.15
0.6
85.7
34.9
Major PPT
77.1
0.61
1
73
41.3
Minor 5ss
36.8
-1.5
3.3
48.8
41.7
Minor BPS
65
0.55
1.1
74.45
37.1

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000026447
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000027323
14417845 - 14463204
45360
ENSAPLT00000021276
14417845 - 14476295
58451