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Intron Name: Anas_platyrhynchos_platyrhynchos_2_144403803_144406494_F

Intron Information:

Intron Rank:

131655

Intron Class:

major

Intron Phase:

Intron Coordinates:

144403803 - 144406494

Intron Length:

2692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGCTCA

5'SS Class:

major

3'SS Sequence:

CTTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGCCTTTTCATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

61.9

39.3

Major BPS

100

1.24

0.5

100

Major PPT

91.7

0.94

0.6

84.4

30.5

Minor 5ss

-0.3

2.8

66.9

43.9

Minor BPS

47.5

-0.2

1.7

55.23

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018172

144403378 - 144408545

5168