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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1447735_1448473_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1447735 - 1448473

Intron Length:

739

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAG

U12 Branch Point Sequence:

GGGCACTCAGCC

Flanking Amino Acid:

HTSFNHLQFRGAPSRSSIPS

Intron Amino Acid Position:

949

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

67.1

44.6

Major BPS

50.8

0.02

1.5

37.5

Major PPT

78.2

0.64

0.9

73.2

37.2

Minor 5ss

35.7

-1.6

3.3

46.8

48.5

Minor BPS

42.3

-0.6

1.8

47.46

40.9

Associated Gene:

Gene:

SCAP

Ensembl Gene ID:

ENSAPLG00000014099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014751

1445644 - 1468963

23320