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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1448899_1449130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1448899 - 1449130

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CACGCCGTAATT

Flanking Amino Acid:

VAGRSNGKLEVWDAIEGTLR

Intron Amino Acid Position:

893

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

80.6

0.69

0.7

72.9

31.9

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

48.6

-0

2.1

64.11

46.8

Associated Gene:

Gene:

SCAP

Ensembl Gene ID:

ENSAPLG00000014099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014751

1445644 - 1468963

23320