Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_144983599_144985425_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144983599 - 144985425

Intron Length:

1827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGCTGG

5'SS Class:

major

3'SS Sequence:

TGGCTCGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

ATTTCTTAAACT

Flanking Amino Acid:

GRNFLSTPQFLYRWLPNRRG

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

1.1

55.3

44.3

Major BPS

82.2

0.8

71.9

35.8

Major PPT

62.8

0.29

54.1

41.4

Minor 5ss

45.8

-0.4

2.9

61.5

44.3

Minor BPS

74.9

0.86

1.6

90.07

34.1

Associated Gene:

Gene:

DERL1

Ensembl Gene ID:

ENSAPLG00000026389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038839

144975510 - 144997193

21684

ENSAPLT00000028802

144982497 - 144997193

14697