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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1450010_1450722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1450010 - 1450722

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTCGG

5'SS Class:

major

3'SS Sequence:

CCTTCCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

TGGTGCTCAGCT

Flanking Amino Acid:

VPLVLRGHLMDIECLASDGM

Intron Amino Acid Position:

723

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

56.3

48.1

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

80.2

0.68

0.7

72.2

32.4

Minor 5ss

32.4

-2

3.1

37.7

42.2

Minor BPS

47.5

-0.1

2.2

69.1

47.2

Associated Gene:

Gene:

SCAP

Ensembl Gene ID:

ENSAPLG00000014099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014751

1445644 - 1468963

23320