Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_145087172_145088379_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145087172 - 145088379

Intron Length:

1208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTGTC

5'SS Class:

major

3'SS Sequence:

CCTTCTGCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

TAAATCTGAAAT

Flanking Amino Acid:

DVCHLDLPEEIQKLFNKEFG

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

74.2

34.5

Major BPS

0.5

1.1

76.9

32.8

Major PPT

75.3

0.57

0.8

73.1

31.8

Minor 5ss

43.4

-0.7

3.1

61.2

43.7

Minor BPS

53.4

0.19

1.6

69.4

40.4

Associated Gene:

Gene:

ATAD2

Ensembl Gene ID:

ENSAPLG00000023462

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020918

145080423 - 145096103

15681

ENSAPLT00000019194

145084442 - 145096942

12501

ENSAPLT00000017245

145084442 - 145096942

12501

ENSAPLT00000023480

145080089 - 145091947

11859