Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_145092097_145092514_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145092097 - 145092514

Intron Length:

418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TGGGCCTTGACT

Flanking Amino Acid:

LLDELAEKCIGYCGADIKSL

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

68.2

42.8

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

79.6

0.67

0.9

81.2

36.5

Minor 5ss

35.7

-1.6

3.2

45.4

43.6

Minor BPS

70.6

0.73

1.4

79.87

42.4

Associated Gene:

Gene:

ATAD2

Ensembl Gene ID:

ENSAPLG00000023462

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020918

145080423 - 145096103

15681