Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_145107724_145114533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145107724 - 145114533

Intron Length:

6810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTATTTTTATCC

Flanking Amino Acid:

DSRRFNYVVRLLELIAKSQL

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

73.7

32.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.8

0.8

0.7

29.9

Minor 5ss

26.1

-2.7

2.9

22.6

37.5

Minor BPS

58.6

0.25

1.6

66.08

40.1

Associated Gene:

Gene:

FBXO32

Ensembl Gene ID:

ENSAPLG00000005288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030025

145106360 - 145121296

14937

ENSAPLT00000005493

145106360 - 145121296

14937