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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_145114627_145115313_R

Intron Information:

Intron Rank:
3
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
145114627 - 145115313
Intron Length:
687

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTGAGTAGG
5'SS Class:
strong_major
3'SS Sequence:
TTTTTTTTCTTAG|C
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
AAAACAT
U12 Branch Point Sequence:
TCTGCCAAAACA
Flanking Amino Acid:
IYVHKGSTKERHGYCTLGEA
Intron Amino Acid Position:
94

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
90.5
0.96
0.8
77.8
38.7
Major BPS
54.4
0.11
1
61.4
34.3
Major PPT
91.3
0.93
0.5
92.5
17.5
Minor 5ss
29.7
-2.3
2.6
33.4
41.8
Minor BPS
50.4
0.01
2.1
67.8
44.7

Associated Gene:

Gene:
FBXO32
Ensembl Gene ID:
ENSAPLG00000005288
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000030025
145106360 - 145121296
14937
ENSAPLT00000005493
145106360 - 145121296
14937