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Intron Name: Anas_platyrhynchos_platyrhynchos_2_145187923_145189622_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
145187923 - 145189622

Intron Length:
1700

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTGGGGCGG

5'SS Class:
major

3'SS Sequence:
TCTTCTTTTCAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGCTGAC

U12 Branch Point Sequence:
CTTCTTTTCAAG

Flanking Amino Acid:
WARLPASVKRGLGNSQREYE

Intron Amino Acid Position:
25

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
62
0.28
1.1
42.2
46.3

Major BPS
57.5
0.19
1.1
48.8
38.1

Major PPT
79.6
0.67
1
78.8
33.5

Minor 5ss
22.9
-3.1
3.2
20.1
37.8

Minor BPS
46
-0.4
1.9
52.95
42.3

Associated Gene:

Gene:
FAM91A1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

145187851 - 145210974
23124

145187851 - 145210974
23124