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Intron Name: Anas_platyrhynchos_platyrhynchos_2_145191794_145193247_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
145191794 - 145193247

Intron Length:
1454

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTAAGTATT

5'SS Class:
major

3'SS Sequence:
AATTATTTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAATTAT

U12 Branch Point Sequence:
AAAAACTTAATT

Flanking Amino Acid:
DSLPNFTAADCLRLLGIGRN

Intron Amino Acid Position:
123

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.7
0.68
1.1
84.2
33.6

Major BPS
76.9
0.67
1
66.3
40.4

Major PPT
81.4
0.71
0.9
77.9
40.2

Minor 5ss
44.6
-0.6
2.9
70.4
39.5

Minor BPS
59.9
0.39
1.5
70.94
39.3

Associated Gene:

Gene:
FAM91A1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

145187851 - 145210974
23124

145187851 - 145210974
23124