Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_145199436_145200328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145199436 - 145200328

Intron Length:

893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCACATTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCACATTAATA

Flanking Amino Acid:

WKNVPSVNRLKSTLDPQKML

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

76.1

31.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.2

0.39

0.9

62.7

37.4

Minor 5ss

36.7

-1.5

3.5

39.9

Minor BPS

64.4

0.45

1.6

73.33

38.5

Associated Gene:

Gene:

FAM91A1

Ensembl Gene ID:

ENSAPLG00000005727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028529

145187851 - 145210974

23124

ENSAPLT00000005978

145187851 - 145210974

23124