About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_145207916_145208192_F


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
145207916 - 145208192

Intron Length:
277

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAAAGCA

5'SS Class:
strong_major

3'SS Sequence:
TTTGTTTCTTTAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTTAA

U12 Branch Point Sequence:
TTTTCTTAAAAT

Flanking Amino Acid:
MDSAVKQSLEVPTTELEWVP

Intron Amino Acid Position:
715

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.2
0.74
0.9
71.1
32.5

Major BPS
82.2
0.8
0.8
71.9
35.8

Major PPT
86.3
0.82
0.7
85.6
29.2

Minor 5ss
30.1
-2.3
3.3
39.5
45.9

Minor BPS
70
0.71
1.7
88.96
35.8

Associated Gene:

Gene:
FAM91A1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

145187851 - 145210974
23124

145187851 - 145210974
23124