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Intron Name: Anas_platyrhynchos_platyrhynchos_2_145268389_145269113_F


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
2

Intron Coordinates:
145268389 - 145269113

Intron Length:
725

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTGTCCTT

5'SS Class:
weak_major

3'SS Sequence:
GTGATTGACACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTGAT

U12 Branch Point Sequence:
TGTTTTGTGATT

Flanking Amino Acid:
VFASLSPKRKRAKLVPRIHE

Intron Amino Acid Position:
72

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
57.9
0.19
1.3
57.6
46.7

Major BPS
81.2
0.78
1.1
71.4
45.1

Major PPT
60.4
0.23
1.1
53.6
45

Minor 5ss
38.8
-1.3
3.4
57.1
47

Minor BPS
51.1
0.12
2
74.33
37.3

Associated Gene:

Gene:
FER1L6

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

145268162 - 145329084
60923