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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1452694_1453207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1452694 - 1453207

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGCATG

5'SS Class:

major

3'SS Sequence:

TCTCCTCACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TAATTTTGAAAT

Flanking Amino Acid:

RTRLAQRLIMAGTVIWIGIL

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

65.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

74.1

0.54

0.8

69.4

Minor 5ss

41.7

-0.9

3.2

53.6

44.9

Minor BPS

56.9

0.29

1.5

72.08

38.2

Associated Gene:

Gene:

SCAP

Ensembl Gene ID:

ENSAPLG00000014099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025464

1451556 - 1470778

19223

ENSAPLT00000014751

1445644 - 1468963

23320