Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_145288078_145288652_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145288078 - 145288652

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CTTTGCATAATA

Flanking Amino Acid:

NTLEKMADHLEESLEQVKDL

Intron Amino Acid Position:

615

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

72.3

37.7

Major BPS

0.62

1.4

85.7

34.9

Major PPT

77.9

0.63

0.8

77.1

37.1

Minor 5ss

33.2

-1.9

3.2

40.6

40.8

Minor BPS

55.8

0.18

2.1

71.88

40.7

Associated Gene:

Gene:

FER1L6

Ensembl Gene ID:

ENSAPLG00000006119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006395

145268162 - 145329084

60923