Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_145289522_145292212_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145289522 - 145292212

Intron Length:

2691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TCTTTCCTGATT

Flanking Amino Acid:

KRLLLFRQELEALSNDAKGI

Intron Amino Acid Position:

679

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

75.9

33.3

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

79.3

0.66

0.9

73.3

35.8

Minor 5ss

42.5

-0.8

3.1

54.4

45.2

Minor BPS

61.3

0.44

1.6

78.97

37.7

Associated Gene:

Gene:

FER1L6

Ensembl Gene ID:

ENSAPLG00000006119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006395

145268162 - 145329084

60923