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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1453427_1453531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1453427 - 1453531

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGACG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TTTTTCTGACTC

Flanking Amino Acid:

VLSIDIRRMELADLNKRLPA

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

72.1

39.1

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

76.4

0.59

0.9

31.8

Minor 5ss

27.1

-2.6

2.9

31.3

42.6

Minor BPS

60.5

0.31

1.7

74.51

36.5

Associated Gene:

Gene:

SCAP

Ensembl Gene ID:

ENSAPLG00000014099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014751

1445644 - 1468963

23320

ENSAPLT00000025464

1451556 - 1470778

19223