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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1453631_1455842_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1453631 - 1455842

Intron Length:

2212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTGCTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

GCTGCCGTAGCT

Flanking Amino Acid:

GYFTLVPAIQEFCLFAVVGL

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

0.45

62.2

39.8

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

47.3

-0.1

2.3

68.24

48.3

Associated Gene:

Gene:

SCAP

Ensembl Gene ID:

ENSAPLG00000014099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025464

1451556 - 1470778

19223

ENSAPLT00000014751

1445644 - 1468963

23320