Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_145550069_145551980_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145550069 - 145551980

Intron Length:

1912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTGTT

5'SS Class:

major

3'SS Sequence:

TGTGTTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

CTGTCCCTAACG

Flanking Amino Acid:

LPSSKIPSWKDWAKPGPYDQ

Intron Amino Acid Position:

455

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

79.1

34.5

Major BPS

0.57

73.6

28.6

Major PPT

75.2

0.57

0.8

73.8

36.8

Minor 5ss

41.1

-1

3.1

58.6

Minor BPS

63.7

0.29

1.8

67.97

45.4

Associated Gene:

Gene:

MTSS1

Ensembl Gene ID:

ENSAPLG00000015070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015743

145546723 - 145658762

112040

ENSAPLT00000007406

145546723 - 145658762

112040