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Intron Name: Anas_platyrhynchos_platyrhynchos_2_145562881_145563803_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
145562881 - 145563803

Intron Length:
923

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTAGCTTG

5'SS Class:
major

3'SS Sequence:
TGTCTTTCATCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTGAT

U12 Branch Point Sequence:
TTGTCTTTCATC

Flanking Amino Acid:
PHKLPSSSEQVILDLKGSDY

Intron Amino Acid Position:
247

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.6
0.65
1.2
70.9
41.9

Major BPS
88.6
0.96
0.8
77.7
37.1

Major PPT
78.7
0.65
0.9
78.3
34.8

Minor 5ss
43.8
-0.7
2.8
56.2
48

Minor BPS
63.8
0.42
1.7
73.46
38.5

Associated Gene:

Gene:
MTSS1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

145546723 - 145658762
112040

145546723 - 145658762
112040