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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1455938_1456860_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1455938 - 1456860

Intron Length:

923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCACC

5'SS Class:

major

3'SS Sequence:

GTTTTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TCTCCTTTTACC

Flanking Amino Acid:

DLEVKLRIAQGLSNESWSIM

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

69.7

41.3

Major BPS

74.2

0.6

39.4

Major PPT

81.5

0.71

0.8

73.7

36.9

Minor 5ss

39.3

-1.2

3.1

52.3

44.6

Minor BPS

63.4

0.4

1.6

39.3

Associated Gene:

Gene:

SCAP

Ensembl Gene ID:

ENSAPLG00000014099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014751

1445644 - 1468963

23320

ENSAPLT00000025464

1451556 - 1470778

19223