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Intron Name: Anas_platyrhynchos_platyrhynchos_2_145749559_145749970_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145749559 - 145749970

Intron Length:

412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTCCTTTGCA

Flanking Amino Acid:

FPKLQYNKNLGVVCKRPADQ

Intron Amino Acid Position:

1061

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

0.97

0.6

88.6

20.7

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

49.3

-0

3.6

83.52

Associated Gene:

Gene:

WASHC5

Ensembl Gene ID:

ENSAPLG00000014127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014807

145747455 - 145774856

27402