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Intron Name: Anas_platyrhynchos_platyrhynchos_2_145769822_145770077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145769822 - 145770077

Intron Length:

256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CGTTTCCGAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

CGTTTCCGAACA

Flanking Amino Acid:

LLNEDGKQLLCEALYLYGVM

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

66.9

0.38

62.2

38.7

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

51.3

0.04

1.8

65.53

40.5

Associated Gene:

Gene:

WASHC5

Ensembl Gene ID:

ENSAPLG00000014127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014807

145747455 - 145774856

27402