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Intron Name: Anas_platyrhynchos_platyrhynchos_2_145777632_145778359_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145777632 - 145778359

Intron Length:

728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCGTT

5'SS Class:

major

3'SS Sequence:

CTGTTATTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAA

U12 Branch Point Sequence:

TATCTGTTATTT

Flanking Amino Acid:

TLGSAGTICKSNDFKMPGAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

72.2

39.5

Major BPS

64.9

0.37

37.5

Major PPT

81.8

0.72

0.9

73.4

Minor 5ss

35.4

-1.7

3.8

54.5

49.7

Minor BPS

47.5

-0.1

2.2

69.92

41.4

Associated Gene:

Gene:

NSMCE2

Ensembl Gene ID:

ENSAPLG00000014092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034925

145777515 - 145846406

68892

ENSAPLT00000014672

145777515 - 145835457

57943