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Intron Name: Anas_platyrhynchos_platyrhynchos_2_145834135_145835443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

145834135 - 145835443

Intron Length:

1309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TCCTAATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TAATTCCTAATT

Flanking Amino Acid:

KDQLKEMRKQCVCN*

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.8

34.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

78.5

0.64

0.9

69.3

40.5

Minor 5ss

44.3

-0.6

2.9

62.8

41.9

Minor BPS

63.6

0.51

1.6

78.63

37.3

Associated Gene:

Gene:

NSMCE2

Ensembl Gene ID:

ENSAPLG00000014092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014672

145777515 - 145835457

57943