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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1461195_1461796_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1461195 - 1461796

Intron Length:

602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAGGTTTG

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TGCTTCGTAACA

Flanking Amino Acid:

ILFAYIYFSTRKIDMVKSKW

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.3

69.7

43.7

Major BPS

0.62

1.4

85.7

34.9

Major PPT

89.5

0.89

0.7

87.9

29.5

Minor 5ss

43.8

-0.7

3.1

56.5

41.8

Minor BPS

0.28

71.26

41.2

Associated Gene:

Gene:

SCAP

Ensembl Gene ID:

ENSAPLG00000014099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025464

1451556 - 1470778

19223

ENSAPLT00000014751

1445644 - 1468963

23320