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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1461970_1462819_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1461970 - 1462819

Intron Length:

850

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAGC

5'SS Class:

major

3'SS Sequence:

ATTTTCACATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTATTTTCACA

Flanking Amino Acid:

VTLGLQRYDSRFLSSLRSRL

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

38.8

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

74.3

0.55

0.9

72.9

36.7

Minor 5ss

31.2

-2.1

3.4

42.5

44.6

Minor BPS

60.4

0.32

1.8

75.15

36.6

Associated Gene:

Gene:

SCAP

Ensembl Gene ID:

ENSAPLG00000014099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025464

1451556 - 1470778

19223

ENSAPLT00000014751

1445644 - 1468963

23320