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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1462926_1463757_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1462926 - 1463757

Intron Length:

832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTTTGTTCATCC

Flanking Amino Acid:

KTLQTSATLKDLLFGLPGKY

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

73.3

36.4

Major BPS

84.8

0.86

85.7

34.9

Major PPT

85.9

0.81

0.8

80.6

Minor 5ss

30.8

-2.2

3.3

41.8

Minor BPS

49.1

-0

2.2

70.17

41.7

Associated Gene:

Gene:

SCAP

Ensembl Gene ID:

ENSAPLG00000014099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014751

1445644 - 1468963

23320

ENSAPLT00000025464

1451556 - 1470778

19223