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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1463979_1467158_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1463979 - 1467158

Intron Length:

3180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTTACT

5'SS Class:

major

3'SS Sequence:

GTTTGCATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTGTTTGCATT

Flanking Amino Acid:

EEIRNHALRDSSGVKSLEEV

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

77.3

37.6

Major BPS

0.62

1.4

85.7

34.9

Major PPT

78.7

0.65

0.9

74.5

Minor 5ss

-1.5

52.4

44.2

Minor BPS

47.4

-0.1

1.9

71.39

40.7

Associated Gene:

Gene:

SCAP

Ensembl Gene ID:

ENSAPLG00000014099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014751

1445644 - 1468963

23320

ENSAPLT00000025464

1451556 - 1470778

19223