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Intron Name: Anas_platyrhynchos_platyrhynchos_2_146599705_146602801_F

Intron Information:

Intron Rank:

123865

Intron Class:

major

Intron Phase:

Intron Coordinates:

146599705 - 146602801

Intron Length:

3097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

AACTGTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

ATCTCTGTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

66.3

0.37

58.3

42.2

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

0.01

2.1

65.5

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030211

146599037 - 146640709

41673