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Intron Name: Anas_platyrhynchos_platyrhynchos_2_146636104_146639700_F

Intron Information:

Intron Rank:

123869

Intron Class:

major

Intron Phase:

Intron Coordinates:

146636104 - 146639700

Intron Length:

3597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

ATACAATTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

85.3

0.79

0.8

80.2

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

56.9

0.3

1.8

75.93

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038180

146635269 - 146640901

5633