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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1467317_1468602_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1467317 - 1468602

Intron Length:

1286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACGGCTT

5'SS Class:

major

3'SS Sequence:

GTTTTCCCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTGTTTTCATT

Flanking Amino Acid:

QGDLGERPDWYVGAPVAYIQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

64.5

46.9

Major BPS

100

1.24

0.5

100

Major PPT

79.5

0.66

0.8

73.3

31.8

Minor 5ss

35.2

-1.7

3.7

47.5

Minor BPS

50.7

0.1

1.8

71.21

40.9

Associated Gene:

Gene:

SCAP

Ensembl Gene ID:

ENSAPLG00000014099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025464

1451556 - 1470778

19223

ENSAPLT00000014751

1445644 - 1468963

23320