Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_146803870_146804598_R

Intron Information:

Intron Rank:

132793

Intron Class:

major

Intron Phase:

Intron Coordinates:

146803870 - 146804598

Intron Length:

729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGCAGC

5'SS Class:

major

3'SS Sequence:

TTGCTCCATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTCTACACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.2

47.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.56

0.9

66.7

39.7

Minor 5ss

37.9

-1.4

3.1

42.8

44.6

Minor BPS

59.4

0.29

2.1

78.35

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033217

146802308 - 146804853

2546