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Intron Name: Anas_platyrhynchos_platyrhynchos_2_14686301_14687857_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14686301 - 14687857

Intron Length:

1557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

TTTTTTTTGTTT

Flanking Amino Acid:

RFEVYGCKITDYPCSGMLGM

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.8

38.5

Major BPS

0.65

1.1

77.4

37.3

Major PPT

92.1

0.95

0.5

89.1

19.9

Minor 5ss

38.8

-1.3

3.4

58.1

46.5

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

NRP1

Ensembl Gene ID:

ENSAPLG00000003623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003738

14605270 - 14714429

109160