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Intron Name: Anas_platyrhynchos_platyrhynchos_2_147427558_147431913_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

147427558 - 147431913

Intron Length:

4356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGTAGTAA

5'SS Class:

major

3'SS Sequence:

CTACCAGAGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CTCACCATGACT

Flanking Amino Acid:

ELSMCATIVNWICESHPDLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

55.7

32.7

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

-0.2

1.2

38.1

Minor 5ss

36.2

-1.6

3.3

42.5

46.9

Minor BPS

56.5

0.29

1.7

73.02

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021354

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021734

147427296 - 147431987

4692