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Intron Name: Anas_platyrhynchos_platyrhynchos_2_147546005_147547086_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147546005 - 147547086

Intron Length:

1082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

TTTTCAATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TATTTTTCAATT

Flanking Amino Acid:

ASVCRVMLETPEYRSRFTNE

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.3

38.8

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

84.5

0.78

0.8

78.8

33.2

Minor 5ss

32.4

-2

2.6

39.4

38.9

Minor BPS

66.4

0.59

1.4

80.75

35.2

Associated Gene:

Gene:

FAM49B

Ensembl Gene ID:

ENSAPLG00000000687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000956

147541587 - 147558753

17167

ENSAPLT00000000943

147541587 - 147582741

41155

ENSAPLT00000031977

147541587 - 147558753

17167

ENSAPLT00000028696

147541587 - 147557869

16283

ENSAPLT00000023157

147541587 - 147571045

29459