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Intron Name: Anas_platyrhynchos_platyrhynchos_2_147548346_147548444_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147548346 - 147548444

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAGGTAAC

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

AACAACTGAACT

Flanking Amino Acid:

LSRMRINNVPAEGENEVNNE

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.1

66.4

39.5

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

84.3

0.77

0.7

79.8

32.4

Minor 5ss

36.8

-1.5

3.1

50.3

40.4

Minor BPS

51.2

0.11

1.7

66.94

42.8

Associated Gene:

Gene:

FAM49B

Ensembl Gene ID:

ENSAPLG00000000687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000956

147541587 - 147558753

17167

ENSAPLT00000000943

147541587 - 147582741

41155

ENSAPLT00000031977

147541587 - 147558753

17167

ENSAPLT00000028696

147541587 - 147557869

16283

ENSAPLT00000023157

147541587 - 147571045

29459