Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_147641075_147644870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147641075 - 147644870

Intron Length:

3796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCATCTAAAACT

Flanking Amino Acid:

PVPLPRKINMGKNKVRRVKT

Intron Amino Acid Position:

1083

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

83.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

79.8

0.67

0.8

77.7

35.6

Minor 5ss

40.4

-1.1

3.2

56.3

42.5

Minor BPS

52.5

0.16

1.9

73.34

43.6

Associated Gene:

Gene:

ASAP1

Ensembl Gene ID:

ENSAPLG00000005640

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033809

147638863 - 147784733

145871

ENSAPLT00000005937

147638863 - 147765767

126905