Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_147672326_147673916_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

147672326 - 147673916

Intron Length:

1591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGGATT

5'SS Class:

major

3'SS Sequence:

CATTTGTTATTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCTTATTA

Flanking Amino Acid:

LHLVDFLVQNCGNLDKQTAL

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

76.9

37.7

Major BPS

100

1.24

0.5

100

Major PPT

71.3

0.48

70.6

39.6

Minor 5ss

44.4

-0.6

3.2

62.6

43.4

Minor BPS

73.2

0.72

1.5

82.59

32.6

Associated Gene:

Gene:

ASAP1

Ensembl Gene ID:

ENSAPLG00000005640

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033809

147638863 - 147784733

145871

ENSAPLT00000005937

147638863 - 147765767

126905