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Intron Name: Anas_platyrhynchos_platyrhynchos_2_14797330_14798216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14797330 - 14798216

Intron Length:

887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATT

Flanking Amino Acid:

DAIMQVAVCGDQIGWRNVTR

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.7

0.4

1.1

72.1

37.9

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

74.3

0.84

1.2

86.64

33.8

Associated Gene:

Gene:

ITGB1

Ensembl Gene ID:

ENSAPLG00000009293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046467

14772375 - 14816129

43755

ENSAPLT00000018684

14772375 - 14815923

43549

ENSAPLT00000017287

14772375 - 14816129

43755

ENSAPLT00000009794

14772375 - 14809935

37561